Open.ConductScience | Blog - Page 2 of 19

GenomeGraphR: A user-friendly open-source web application for foodborne pathogen whole genome sequencing data integration, analysis, and visualization

Food safety risk assessments and large-scale epidemiological investigations have the potential to provide better and new...

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Oct 11

by Open Source Science

An open-sourced, web-based application to improve our ability to understand hunter and angler purchasing behavior from license data

State fish and wildlife agencies rely on hunters and anglers (i.e., sportspersons) to fund management actions...

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Oct 11

by Open Source Science

ChimericSeq: An open-source, user-friendly interface for analyzing NGS data to identify and characterize viral-host chimeric sequences

Identification of viral integration sites has been important in understanding the pathogenesis and progression of diseases...

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Oct 11

by Open Source Science

Exploiting open source 3D printer architecture for laboratory robotics to automate high-throughput time-lapse imaging for analytical microbiology

Growth in open-source hardware designs combined with the low-cost of high performance optoelectronic and robotics components...

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Oct 11

by Open Source Science

An Open Source Based High Content Screening Method for Cell Biology Laboratories Investigating Cell Spreading and Adhesion

Adhesion dependent mechanisms are increasingly recognized to be important for a wide range of biological processes,...

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Oct 11

by Open Source Science

The effect of subject measurement error on joint kinematics in the conventional gait model: Insights from the open-source pyCGM tool using high performance computing methods

The conventional gait model (CGM) is a widely used biomechanical model which has been validated over...

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Oct 11

by Open Source Science

PRIMED: PRIMEr Database for Deleting and Tagging All Fission and Budding Yeast Genes Developed Using the Open-Source Genome Retrieval Script (GRS)

The fission (Schizosaccharomyces pombe) and budding (Saccharomyces cerevisiae) yeasts have served as excellent models for many...

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Oct 11

by Open Source Science

IHC Profiler: An Open Source Plugin for the Quantitative Evaluation and Automated Scoring of Immunohistochemistry Images of Human Tissue Samples

In anatomic pathology, immunohistochemistry (IHC) serves as a diagnostic and prognostic method for identification of disease...

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Oct 11

by Open Source Science

A High Performance, Cost-Effective, Open-Source Microscope for Scanning Two-Photon Microscopy that Is Modular and Readily Adaptable

Two-photon laser scanning microscopy has revolutionized the ability to delineate cellular and physiological function in acutely...

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Oct 11

by Open Source Science

JMS: An Open Source Workflow Management System and Web-Based Cluster Front-End for High Performance Computing

Complex computational pipelines are becoming a staple of modern scientific research. Often these pipelines are resource-intensive...

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Oct 11

by Open Source Science

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