OXSA: An open-source magnetic resonance spectroscopy analysis toolbox in MATLAB
In vivo magnetic resonance spectroscopy provides insight into metabolism in the human body. New acquisition protocols...
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Rift Valley fever: An open-source transmission dynamics simulation model
Rift Valley fever (RVF) is one of the major viral zoonoses in Africa, affecting humans and...
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Quanfima: An open source Python package for automated fiber analysis of biomaterials
Hybrid 3D scaffolds composed of different biomaterials with fibrous structure or enriched with different inclusions (i.e.,...
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pyAudioAnalysis: An Open-Source Python Library for Audio Signal Analysis
Audio information plays a rather important role in the increasing digital content that is available today,...
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Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain
We have developed an open software platform called Neurokernel for collaborative development of comprehensive models of...
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Specvis: Free and open-source software for visual field examination
Visual field impairment affects more than 100 million people globally. However, due to the lack of...
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ExpressionDB: An open source platform for distributing genome-scale datasets
RNA-sequencing (RNA-seq) and microarrays are methods for measuring gene expression across the entire transcriptome. Recent advances...
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RaCaT: An open source and easy to use radiomics calculator tool
The widely known field ‘Radiomics’ aims to provide an extensive image based phenotyping of e.g. tumors...
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PyLandStats: An open-source Pythonic library to compute landscape metrics
Quantifying the spatial pattern of landscapes has become a common task of many studies in landscape...
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An Open Source Simulation Model for Soil and Sediment Bioturbation
Bioturbation is one of the most widespread forms of ecological engineering and has significant implications for...
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